NEWS

DiNAMIC.Duo 1.0.4 (2025-10-15)

Further updates to the dataPrep() function to better handle timeout errors when the Ensembl archive is not available

The dataPrep() function was updated in order to fail gracefully if an Ensembl Archive is not available.

The DESCRIPTION file was updated to include SystemRequirements that were not required in earlier versions of the package. Also, the citation for the DiNAMIC.Duo manuscript was added.
The onAttach() function was removed. Previously, there was an interactive session at start-up during which users were asked whether Miniconda was installed. If not, they were prompted to install it. This has been deprecated. Now the "Python and NumPy" subsection of the vignette tells users how to use the reticulate R package to install Miniconda and NumPy.
The vignette was updated and now includes R code to install Miniconda and NumPy using the reticulate R package.

Additional descriptive text was added in the documentation for most of the functions.

The documentation for the included data (luadSubset, luscSubset, and pD) was modified to address NOTEs generated by CRAN that were not present at the time of the initial submission.